4.1 BLAST

The BLAST function enables users to input nucleic acid or protein sequences for analysis. It supports the selection of all established species nucleic acid or protein libraries for alignment, including:

  1. Genome library

  2. Protein library

It also supports users to upload data by dragging and dropping files.

Before BLAST, you MUST need to select one or more species.

PlanT2T provides a variety of species for users to choose from. The species selected will be used as the reference library for the BLAST analysis.

4.1.1 Basic usage

  1. Select species - Select the species to be used as the reference library for BLAST analysis.

  2. Input sequence - Enter the sequence to be analyzed. Or upload the fasta file to be analyzed.

  3. Set parameters - Set the parameters for the BLAST analysis.

  4. GO serach - Click the “GO” button to start the BLAST analysis.

4.1.2 Advanced usage

Except for searching for species genomes one by one, users can also click on the left evolutionary tree to batch select the species to be compared, which is very useful for quickly retrieving all species of a genus or family.

4.1.2 BLAST history

The BLAST history function records the BLAST analysis results of the user. Users can view the BLAST analysis results by clicking on the corresponding analysis record.

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