4.10 Primer Designer

The Primer Design tool integrates with Primer3 to assist users in designing PCR primers based on the genomic sequences available in T2T-Hub. After choosing a species and genomic region and setting parameters such as product length and Tm, users can obtain their primer sequences for lab work.

4.10.1 Detailed reports

After submitting a primer design job, users can access a comprehensive report that includes:

  • Primer Sequences: The designed forward and reverse primer sequences.
  • Melting Temperature (Tm): The calculated melting temperatures for each primer.
  • GC Content: The percentage of guanine and cytosine bases in each primer.

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