A Single Cell Resource Database for Pancreatic Ductal AdenoCarcinoma


Overview

Abstract

The scPDAC database is a comprehensive resource dedicated to single-cell RNA sequencing (scRNA-seq) data from Pancreatic Ductal Adenocarcinoma (PDAC). The database was meticulously constructed to facilitate a deeper understanding of the cellular heterogeneity and the intricate microenvironment of PDAC, which is crucial for advancing cancer research and therapeutic development.

Purpose

The scPDAC database serves as a foundational tool for the scientific community, offering a detailed and searchable compendium of scRNA-seq data that can be leveraged to uncover novel insights into the biology of Pancreatic Ductal Adenocarcinoma (PDAC). With a particular focus on long non-coding RNAs (lncRNAs), the database provides a unique platform for researchers to explore the role of these molecules in the cellular heterogeneity and tumor microenvironment of PDAC.

Statistics

13
Cell types
32
Cell subtypes
441,758
Cells
107,093
lncRNAs
18,823
mRNAs

Cite Us

Zhuojin Li, Haoyu Chao, Chenlu Zhang, et al., Dijun Chen, Single Cell Transcriptomic Analyses of LncRNA Expression Patterns and Regulatory Networks in Pancreatic Ductal Adenocarcinoma Liver Metastasis. Unpublished 2024, 10(2), 223. View Full-Text

License

scPDAC is free for academic use only. For any commercial use, please contact us for commercial licensing terms.

Update Info

The first version of scPDAC construction has been completed!

JBrowse2 has been embedded into the scPDAC

Blast tools can be used in Tools page

All gene expression pattern can be viewed in GeneExp page

All marker genes can be viewed in Gallery portal

RDS data can be downloaded in Download portal

scPDAC project launched